Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015953497.1_cds_XP_016492621.1_82811
CDS Infomation

[gene=LOC107812104] [db_xref=GeneID:107812104] [protein=autophagy-related protein 13a-like] [protein_id=XP_016492621.1] [location=join(6606..7931,8057..8238,12372..12684)] [gbkey=CDS]
Sequence

ATGGATTTTCAGAGTAACCCACAGGGGGGTGAACATGGAAGATTTGAGCAAATACTTGCT
CAATTTCTTCTTAAGAGCTTGCATATTATTTTGGACTCAAGGGTTCCTTCGATACGACCT
TATGGTGGTAGTGGGGAAGTGAAGAAGAGTGACAGGTGGTTCAATTTGGTGTTGGGAGAT
CGTCCTGCTGTTCTTGATAACTTGAATCAGTTGCACCGGAATTTGGTGGAACCCATGATA
ATAGATATAATACTTGTTCAGGATAAATCTAGTACTTCATTGGAGCACGATTCGAGTACA
GGATTTGCAGGAGGATATACAGAAACTGTTGTGGAGAGGTGGGTTGTACAATGTGAGAAT
CGGAGGTCAATGGTTCCGCACATGGGTGATTCCTCTTTCAAAAAAACATACAAGAAATGC
ATTATACTACTCCGCTCGCTTTATTCAATGATGAGGCTCCTGCCTGCATTCAAGGCCTTC
AGGAAACTATCATTGTCAAGTCATAGTTGTTATTTTGATATCAATTATAAAGTGTCTTCA
TTTAGTGAGCCATTCTCAAGGGCAGCGGAGGCGTTGATGAAGCAATATACTTTTATTCCA
GTTGATTCCCAGCAAGGCAGACTTTCTTTATCTGTGACATATCGGGAAAATTTGGCGGAC
TTCAATCTGGAGATTTCTGCATCCTTTCCGCCTGAGATCATTACAGATTATGTTGGCAGT
CCACTCACTGACCCTATGAGGTCATTCCCTTCTACCTCAATGGATAAGGGTGGTTCATTG
AGAAGGACACAGTCATCTTCTTCAGCACCAGTTCAGCGTCCACAAAGTTGGACTAGTGGT
CTCCTCAGGGCACCTTCTTTACCTCAGCCATATGTAGGATCTCCACCTTTGTACCGTGCA
CCATATGAGCTTTCAACTTCGCCCAGTGATGTGTATGGACAGAGGGTTCCACCTAACTAC
AGATTGCCCACTCTCCACAAAGCAACTAATTATGATGACGACCAGCTTTCCCCTCCATTT
TCACCATCTCCATCTCCATCTCCTTCTCCACCCACATATTTCTCAGGTGCAAATCCTGTG
CAGACTCGTTTGCGTTCAGAAACTGGTCCTGTCAGTATCCCTCATCCATTGATGGACAGA
AGTTCCAAACACATATCTCCTAATTTGTCTGATCCAAACAGGCATTCTCTCCCACCTATG
TCGCCTAGAAGCACAAAGCACGATTCTTCATCCCATGAATCCCCTTCTGGAATCAGGTCA
TCGAGAAAAGTGGATTTGCTAAGGGCTCCAGAGTCAGATACCGGGACTACTAATCCTGGA
CAAAAGGTGTCTACAGATGCTAGAGACGATTCAGGACGGTTTTCAGGTTTACTATCTTCA
AGTGGTTCACCACGTGTTGGGTTTTCTAGAAGTTCTAGCAGATTATCTGTTCAGGATGAC
TTGGATGACTGTGATTTTTCTTGTCCTTTTATAGTTGATGATGTTGATAATGCGGATTCT
AGAGCCAGAGAGACCCTTGATTCAAAAAAAGGTTCAGACACATCTTCTCAAGCATCTGCA
AGAACCAGAAAATCTCAAGACGCTGCTGTAGGTGCCCTTGTTCACATGCTGAGGACTGCT
CCCCCTTTGCGTCAAGATTCTAGCTGTTATACCTCGCGTTCTGTAAAGACAGAAGTAGAG
GGAGAAACTGGCACTGCATCAGGGTTCTATGTTCCTAGAAAGGCATCTGACGCATTGGAG
GAGCTCAAAACTTACACACAATTGAAAGATATGTTACTTTCCAAGAGCACAACCCGCTCG
GGCAGTGAGGGTGGAACATAG

Peptide Sequence

PEP ID

XP_016492621.1
PEP Infomation

PREDICTED: autophagy-related protein 13a-like [Nicotiana tabacum]
Sequence

MDFQSNPQGGEHGRFEQILAQFLLKSLHIILDSRVPSIRPYGGSGEVKKSDRWFNLVLGD
RPAVLDNLNQLHRNLVEPMIIDIILVQDKSSTSLEHDSSTGFAGGYTETVVERWVVQCEN
RRSMVPHMGDSSFKKTYKKCIILLRSLYSMMRLLPAFKAFRKLSLSSHSCYFDINYKVSS
FSEPFSRAAEALMKQYTFIPVDSQQGRLSLSVTYRENLADFNLEISASFPPEIITDYVGS
PLTDPMRSFPSTSMDKGGSLRRTQSSSSAPVQRPQSWTSGLLRAPSLPQPYVGSPPLYRA
PYELSTSPSDVYGQRVPPNYRLPTLHKATNYDDDQLSPPFSPSPSPSPSPPTYFSGANPV
QTRLRSETGPVSIPHPLMDRSSKHISPNLSDPNRHSLPPMSPRSTKHDSSSHESPSGIRS
SRKVDLLRAPESDTGTTNPGQKVSTDARDDSGRFSGLLSSSGSPRVGFSRSSSRLSVQDD
LDDCDFSCPFIVDDVDNADSRARETLDSKKGSDTSSQASARTRKSQDAAVGALVHMLRTA
PPLRQDSSCYTSRSVKTEVEGETGTASGFYVPRKASDALEELKTYTQLKDMLLSKSTTRS
GSEGGT

Transcript Sequence

Gene sequence data has not been registered.